Duplex-Indel: a Snakemake pipeline for somatic Indel calling in Tn5 transposase-based duplex sequencing data

Dong, Guanlan, Nazia Hilal, Shayna Mallett, Bowen Jin, Shulin Mao, Monica Devi Manam, Diane D Shao, Sangita Choudhury, August Yue Huang, and Eunjung Alice Lee. 2026. “Duplex-Indel: a Snakemake Pipeline for Somatic Indel Calling in Tn5 Transposase-Based Duplex Sequencing Data”. Bioinformatics.
Last updated on 05/15/2026