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Kong, Pu, and Park. 2006. “A Multivariate Approach for Integrating Genome-Wide Expression Data and Biological Knowledge”. BioinformaticsBioinformaticsBioinformatics 22: 2373-80.

Tarnavski, McMullen, Schinke, Nie, Kong, and Izumo. 2004. “Mouse Cardiac Surgery: Comprehensive Techniques for the Generation of Mouse Models of Human Diseases and Their Application for Genomic Studies”. Physiol GenomicsPhysiol GenomicsPhysiol Genomics 16: 349-60.

McMullen, Shioi, Huang, Zhang, Tarnavski, Bisping, Schinke, et al. 2004. “The Insulin-Like Growth Factor 1 Receptor Induces Physiological Heart Growth via the Phosphoinositide 3-Kinase(p110alpha) Pathway”. J Biol ChemJ Biol ChemJ Biol Chem 279: 4782-93.

Liadaki, Kho, Sanoudou, Schienda, Flint, AH Beggs, Kohane, and Kunkel. 2005. “Side Population Cells Isolated from Different Tissues Share Transcriptome Signatures and Express Tissue-Specific Markers.”. Exp Cell Res 303 (2): 360-74.

Haslett, Judith, Peter Kang, Mei Han, Alvin Kho, Despina Sanoudou, Jay Volinski, Alan Beggs, Isaac Kohane, and Louis Kunkel. 2005. “The Influence of Muscle Type and Dystrophin Deficiency on Murine Expression Profiles.”. Mamm Genome 16 (10): 739-48.

Liu, Hongye, Alvin Kho, Isaac Kohane, and Yao Sun. 2006. “Predicting Survival Within the Lung Cancer Histopathological Hierarchy Using a Multi-Scale Genomic Model of Development.”. PLoS Med 3 (7): e232.

Schüller, Ulrich, Vivi Heine, Junhao Mao, Alvin Kho, Allison Dillon, Young-Goo Han, Emmanuelle Huillard, et al. 2008. “Acquisition of Granule Neuron Precursor Identity Is a Critical Determinant of Progenitor Cell Competence to Form Shh-Induced Medulloblastoma.”. Cancer Cell 14 (2): 123-34.

Du, Rose, Kelan Tantisira, Vincent Carey, Soumyaroop Bhattacharya, Stephanie Metje, Alvin Kho, Barbara Klanderman, et al. 2009. “Platform Dependence of Inference on Gene-Wise and Gene-Set Involvement in Human Lung Development.”. BMC Bioinformatics 10: 189.

Melén, Erik, Alvin Kho, Sunita Sharma, Roger Gaedigk, Steven Leeder, Thomas Mariani, Vincent Carey, Scott Weiss, and Kelan Tantisira. 2011. “Expression Analysis of Asthma Candidate Genes During Human and Murine Lung Development.”. Respir Res 12: 86.

Tsien, Libermann, Gu, Ho, and Kohane. 2002. “CHIP TUNER: A Web Tool for Evidence-Based Noise Reduction in Gene Discovery.”. Proc AMIA Symp, 810-4.