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Intron retention is a widespread mechanism of tumor-suppressor inactivation

Publication: Journal Article

Jung, Hyunchul, Donghoon Lee, Jongkeun Lee, Donghyun Park, Yeon Jeong Kim, Woong-Yang Park, Dongwan Hong**, Peter J. Park**, and Eunjung Alice Lee**. 2015. “Intron Retention Is a Widespread Mechanism of Tumor-Suppressor Inactivation”. Nature Genetics 47 (11): 1242-8.

Single-neuron sequencing analysis of L1 retrotransposition and somatic mutation in the human brain

Publication: Journal Article

Evrony, Gilad*, Xuyu* Cai, Eunjung Lee, Benjamin Hills, Princess Elhosary, Hillel Lehmann, Parker, et al. 2012. “Single-Neuron Sequencing Analysis of L1 Retrotransposition and Somatic Mutation in the Human Brain”. Cell 151 (3): 483-96.

Immune signatures correlate with L1 retrotransposition in gastrointestinal cancers

Publication: Journal Article

Jung, Hyunchul, Jungkyoon Choi**, and Eunjung Alice Lee**. 2018. “Immune Signatures Correlate With L1 Retrotransposition in Gastrointestinal Cancers”. Genome Research 28 (8): 1136-46.

DeviCNV: Detection and Visualization of Exon-Level Copy Number Variants in Targeted Next Generation Sequencing Data

Publication: Journal Article

Kang, Yeeok, Seong-Hyeuk Nam, Kyung Sun Park, Jong-Won Kim, Eunjung Alice Lee, Jung Min Ko, Kyung-A Lee, and Inho Park. 2018. “DeviCNV: Detection and Visualization of Exon-Level Copy Number Variants in Targeted Next Generation Sequencing Data”. BMC Bioinformatics 19 (381).

Patient-Customized Oligonucleotide Therapy for a Rare Genetic Disease

Publication: Journal Article

Kim, J., C. Hu, C. Moufawad El Achkar, L. E. Black, J. Douville, A. Larson, M. K. Pendergast, et al. 2019. “Patient-Customized Oligonucleotide Therapy for a Rare Genetic Disease”. N Engl J Med 381: 1644-52.

Global impact of somatic structural variation on the DNA methylome of human cancers

Publication: Journal Article

Zhang, Yiqun, Lixing Yang, Melanie Kucherlapati, Angela Hadjipanayis, Angeliki Pantazi, Christopher Bristow, Eunjung Alice Lee, et al. 2019. “Global Impact of Somatic Structural Variation on the DNA Methylome of Human Cancers”. Genome Biol 20 (1): 209.

Identification and Genotyping of Transposable Element Insertions from Genome Sequencing Data

Publication: Journal Article

Chu*, Chong, Boxun Zhao*, Peter Park, and Eunjung Alice Lee. 2020. “Identification and Genotyping of Transposable Element Insertions from Genome Sequencing Data”. Current Protocols in Human Genetics (review) 107(1):e102.

Somatic genomic changes in single Alzheimer’s disease neurons

Publication: Journal Article

Miller*, MB, AY Huang*, Kim, Zhou, SL Kirkham, EA Maury, JS Ziegenfuss, et al. 2022. “Somatic Genomic Changes in Single Alzheimer’s Disease Neurons”. Nature 604 (7907): 714-22.

Somatic Mosaicism in Amyotrophic Lateral Sclerosis and Frontotemporal Dementia Reveals Widespread Degeneration from Focal Mutations

Publication: Journal Article

Zhou*, Zinan, Junho Kim*, August Yue Huang*, Matthew Nolan, Junseok Park, Ryan Doan, Taehwan Shin, et al. 2023. “Somatic Mosaicism in Amyotrophic Lateral Sclerosis and Frontotemporal Dementia Reveals Widespread Degeneration from Focal Mutations”. BioRxiv, Preprint.

Welcome to Junho, the first postdoctoral fellow in the lab!

News: April 01, 2017

Junho (pronounced as 'Juno') joined the lab as the FIRST postdoctoral fellow! He received his Ph.D. in bioinformatics from KAIST in 2014 and did two years of postdoctoral training at Yonsei university college of medicine in South Korea. Welcome, Junho!