Using temporal context to improve biosurveillance.
Reis, Ben, Marcello Pagano, and Kenneth Mandl. 2003. “Using Temporal Context to Improve Biosurveillance.”. Proc Natl Acad Sci U S A 100 (4): 1961-5.
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Comparing the similarity of time-series gene expression using signal processing metrics.
Butte, Bao, Reis, Watkins, and Kohane. 2001. “Comparing the Similarity of Time-Series Gene Expression Using Signal Processing Metrics.”. J Biomed Inform 34 (6): 396-405.
A-to-I RNA editing in autism spectrum disorder
Eran, Kohane, and Kunkel. 2014. “A-to-I RNA Editing in Autism Spectrum Disorder”. In Frontiers in Autism Research : New Horizons for Diagnosis and Treatment , 1st ed., 229-48. Hackensack, NJ: World Scientific Publishing Company.
Divergent dysregulation of gene expression in murine models of fragile X syndrome and tuberous sclerosis
Kong, Sahin, Collins, Wertz, Campbell, Leech, Krueger, Bear, Kunkel, and Kohane. 2014. “Divergent Dysregulation of Gene Expression in Murine Models of Fragile X Syndrome and Tuberous Sclerosis”. Mol AutismMol AutismMol Autism 5: 16.
gSearch: a fast and flexible general search tool for whole-genome sequencing
Song, Hwang, Hsing, Lee, Bohn, and Kong. 2012. “GSearch: a Fast and Flexible General Search Tool for Whole-Genome Sequencing”. BioinformaticsBioinformaticsBioinformatics 28: 2176-7.
Characteristics and predictive value of blood transcriptome signature in males with autism spectrum disorders
Kong, Collins, Shimizu-Motohashi, Holm, Campbell, Lee, Brewster, et al. 2012. “Characteristics and Predictive Value of Blood Transcriptome Signature in Males With Autism Spectrum Disorders”. PLoS OnePLoS OnePLoS One 7: e49475.
Interferon-stimulated gene 15 (ISG15) conjugates proteins in dermatomyositis muscle with perifascicular atrophy
Salajegheh, Kong, Pinkus, Walsh, Liao, Nazareno, Amato, et al. 2010. “Interferon-Stimulated Gene 15 (ISG15) Conjugates Proteins in Dermatomyositis Muscle With Perifascicular Atrophy”. Ann NeurolAnn NeurolAnn Neurol 67: 53-63.
MicroRNA-1 negatively regulates expression of the hypertrophy-associated calmodulin and Mef2a genes
Ikeda, He, Kong, Lu, Bejar, Bodyak, Lee, et al. 2009. “MicroRNA-1 Negatively Regulates Expression of the Hypertrophy-Associated Calmodulin and Mef2a Genes”. Mol Cell BiolMol Cell BiolMol Cell Biol 29: 2193-204.
Integrative analysis reveals the direct and indirect interactions between DNA copy number aberrations and gene expression changes
Lee, Kong, and Park. 2008. “Integrative Analysis Reveals the Direct and Indirect Interactions Between DNA Copy Number Aberrations and Gene Expression Changes”. BioinformaticsBioinformaticsBioinformatics 24: 889-96.
Statistical methods in cardiac gene expression profiling: from image to function
Kong. 2007. “Statistical Methods in Cardiac Gene Expression Profiling: From Image to Function”. Methods Mol BiolMethods Mol BiolMethods Mol Biol 366: 75-105.