The pathogenesis of Epstein-Barr virus persistent infection.
Thorley-Lawson, David, Jared Hawkins, Sean Tracy, and Michael Shapiro. 2013. “The Pathogenesis of Epstein-Barr Virus Persistent Infection.”. Curr Opin Virol 3 (3): 227-32.
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The cycle of EBV infection explains persistence, the sizes of the infected cell populations and which come under CTL regulation.
Hawkins, Jared, Edgar Delgado-Eckert, David Thorley-Lawson, and Michael Shapiro. 2013. “The Cycle of EBV Infection Explains Persistence, the Sizes of the Infected Cell Populations and Which Come under CTL Regulation.”. PLoS Pathog 9 (10): e1003685.
Scalable and cost-effective NGS genotyping in the cloud.
Souilmi, Yassine, Alex Lancaster, Jae-Yoon Jung, Ettore Rizzo, Jared Hawkins, Ryan Powles, Saaïd Amzazi, Hassan Ghazal, Peter Tonellato, and Dennis Wall. 2015. “Scalable and Cost-Effective NGS Genotyping in the Cloud.”. BMC Med Genomics 8 (1): 64.
The digital phenotype.
Jain, Sachin, Brian Powers, Jared Hawkins, and John Brownstein. 2015. “The Digital Phenotype.”. Nat Biotechnol 33 (5): 462-3.
Characterizing Sleep Issues Using Twitter.
McIver, David, Jared Hawkins, Rumi Chunara, Arnaub Chatterjee, Aman Bhandari, Timothy Fitzgerald, Sachin Jain, and John Brownstein. 2015. “Characterizing Sleep Issues Using Twitter.”. J Med Internet Res 17 (6): e140.
Measuring patient-perceived quality of care in US hospitals using Twitter.
Hawkins, Jared, John Brownstein, Gaurav Tuli, Tessa Runels, Katherine Broecker, Elaine Nsoesie, David McIver, et al. 2015. “Measuring Patient-Perceived Quality of Care in US Hospitals Using Twitter.”. BMJ Qual Saf.
Recent Press
Leveraging Twitter for Insights on Patient Experience | HealthLeaders Media Vomiting Up Brunch? Your Angry Tweet May Save Others From Food Poisoning | WBUR How satisfied are patients with their care? Twitter can tell | Boston Globe Insomnia? Your tweets may show it | Boston Globe A temperature...
A virtual look at Epstein-Barr virus infection: simulation mechanism.
Shapiro, Duca, Lee, Delgado-Eckert, Hawkins, Jarrah, Laubenbacher, Polys, Hadinoto, and Thorley-Lawson. 2008. “A Virtual Look at Epstein-Barr Virus Infection: Simulation Mechanism.”. J Theor Biol 252 (4): 633-48.
Bio
Jared Hawkins is a faculty member in the Boston Children’s Hospital Computational Health Informatics Program (Computational Epidemiology Lab) and the Director of Informatics in the Innovation Program at Boston Children’s Hospital. He received a PhD in Immunology from Tufts Medical School and a MMSc...
COSMOS: Python library for massively parallel workflows.
Gafni, Erik, Lovelace Luquette, Alex Lancaster, Jared Hawkins, Jae-Yoon Jung, Yassine Souilmi, Dennis Wall, and Peter Tonellato. 2014. “COSMOS: Python Library for Massively Parallel Workflows.”. Bioinformatics 30 (20): 2956-8.