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Hawkins, Jared, Mark Jones, Paul Plassmann, and David Thorley-Lawson. 2011. “Chemotaxis in Densely Populated Tissue Determines Germinal Center Anatomy and Cell Motility: A New Paradigm for the Development of Complex Tissues.”. PLoS One 6 (12): e27650.

Thorley-Lawson, David, Jared Hawkins, Sean Tracy, and Michael Shapiro. 2013. “The Pathogenesis of Epstein-Barr Virus Persistent Infection.”. Curr Opin Virol 3 (3): 227-32.

Hawkins, Jared, Edgar Delgado-Eckert, David Thorley-Lawson, and Michael Shapiro. 2013. “The Cycle of EBV Infection Explains Persistence, the Sizes of the Infected Cell Populations and Which Come under CTL Regulation.”. PLoS Pathog 9 (10): e1003685.

Souilmi, Yassine, Alex Lancaster, Jae-Yoon Jung, Ettore Rizzo, Jared Hawkins, Ryan Powles, Saaïd Amzazi, Hassan Ghazal, Peter Tonellato, and Dennis Wall. 2015. “Scalable and Cost-Effective NGS Genotyping in the Cloud.”. BMC Med Genomics 8 (1): 64.

Jain, Sachin, Brian Powers, Jared Hawkins, and John Brownstein. 2015. “The Digital Phenotype.”. Nat Biotechnol 33 (5): 462-3.

McIver, David, Jared Hawkins, Rumi Chunara, Arnaub Chatterjee, Aman Bhandari, Timothy Fitzgerald, Sachin Jain, and John Brownstein. 2015. “Characterizing Sleep Issues Using Twitter.”. J Med Internet Res 17 (6): e140.

Hawkins, Jared, John Brownstein, Gaurav Tuli, Tessa Runels, Katherine Broecker, Elaine Nsoesie, David McIver, et al. 2015. “Measuring Patient-Perceived Quality of Care in US Hospitals Using Twitter.”. BMJ Qual Saf.

Shapiro, Duca, Lee, Delgado-Eckert, Hawkins, Jarrah, Laubenbacher, Polys, Hadinoto, and Thorley-Lawson. 2008. “A Virtual Look at Epstein-Barr Virus Infection: Simulation Mechanism.”. J Theor Biol 252 (4): 633-48.

Gafni, Erik, Lovelace Luquette, Alex Lancaster, Jared Hawkins, Jae-Yoon Jung, Yassine Souilmi, Dennis Wall, and Peter Tonellato. 2014. “COSMOS: Python Library for Massively Parallel Workflows.”. Bioinformatics 30 (20): 2956-8.

Cosmopoulos, Katherine, Michiel Pegtel, Jared Hawkins, Howell Moffett, Carl Novina, Jaap Middeldorp, and David Thorley-Lawson. 2009. “Comprehensive Profiling of Epstein-Barr Virus MicroRNAs in Nasopharyngeal Carcinoma.”. J Virol 83 (5): 2357-67.