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Chao, Michael, Justin Pritchard, Yanjia Zhang, Eric Rubin, Jonathan Livny, Brigid Davis, and Matthew Waldor. 2013. “High-Resolution Definition of the Vibrio Cholerae Essential Gene Set With Hidden Markov Model-Based Analyses of Transposon-Insertion Sequencing Data.”. Nucleic Acids Research.

SantaMaria, JP, Sadaka, Moussa, Brown, Zhang, EJ Rubin, MS Gilmore, and Walker. 2014. “Compound-Gene Interaction Mapping Reveals Distinct Roles for Staphylococcus Aureus Teichoic Acids”. PNAS 111 (34): 12510-5.

Zhang, Yanjia Jason, and Gillian Lieberman. 2013. “Clinical Decision Making in Tuberculosis: How Radiology Can Help.”. Lieberman’s Learning Lab, Http://Eradiology.bidmc.harvard.Edu. 2013.

Zhang, Yanjia, Thomas Ioerger, Curtis Huttenhower, Jarukit Long, Christopher Sassetti, James Sacchettini, and Eric Rubin. 2012. “Global Assessment of Genomic Regions Required for Growth in Mycobacterium Tuberculosis”. PLoS Pathogens 8.

Herzog, Erica, John VanArnam, Buqu Hu, Jason Zhang, Chen, Haberman, and Diane Krause. 2007. “Lung-Specific Nuclear Reprogramming Is Accompanied by Heterokaryon Formation and Y Chromosome Loss Following Bone Marrow Transplantation and Secondary Inflammation”. FASEB Journal 21.

DeJesus, Michael, Yanjia Zhang, Christopher Sassetti, Eric Rubin, James Sacchettini, and Thomas Ioerger. 2013. “Bayesian Analysis of Gene Essentiality Based on Sequencing of Transposon Insertion Libraries”. Bioinformatics 29.

Zhang, Yanjia, and Eric Rubin. 2013. “Feast or Famine: The Host–pathogen Battle over Amino Acids”. Cellular Microbiology.

Ngubane, Nqobile, Lionel Gresh, Thomas Ioerger, James Sacchettini, Yanjia Zhang, Eric Rubin, Alexander Pym, and Khati. 2013. “High-Throughput Sequencing Enhanced Phage Display Identifies Peptides That Bind Mycobacteria.”. PLoS One 8 (11): e77844.

Maciag, Karolina, and Jason Zhang. 2010. “NTDs: Diseases of the Bottom Billion”. Science in the News, Sitn.hms.harvard.Edu. 2010.

Mavrici, MJ Marakalala, JM Holton, DM Prigozhin, CL Gee, Zhang, EJ Rubin, and Alber. 2014. “Mycobacterium Tuberculosis FtsX Extracellular Domain Activates the Peptidoglycan Hydrolase, RipC”. PNAS 111 (22): 8037-42.