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Chu*, Chong, Boxun Zhao*, Peter Park, and Eunjung Alice Lee. 2020. “Identification and Genotyping of Transposable Element Insertions from Genome Sequencing Data”. Current Protocols in Human Genetics (review) 107(1):e102.

Jain, Dhawal, Chong Chu, Burak Han Alver, Soohyun Lee, Eunjung Alice Lee, and Peter Park. 2020. “HiTea: a Computational Pipeline to Identify Non-Reference Transposable Element Insertions in Hi-C Data”. Bioinformatics btaa923.

Rodriguez-Martin, Bernardo, Eva Alvarez, Adrian Baez-Ortega, . , Eunjung Alice Lee, . , PCAWG-Structural-Variation-Working-Group, Peter Campbell, Jose Tubio, and PCAWG-Consortium. 2020. “Pan-Cancer Analysis of Whole Genomes Identifies Driver Rearrangements Promoted by LINE-1 Retrotransposition”. Nat Genet 52 (3): 306-19.

Huang*, August Yue, Pengpeng Li*, Rachel Rodin, Sonia Kim, Yanmei Dou, Connor Kenny, Shyam Akula, et al. 2020. “Parallel RNA and DNA Analysis After Deep Sequencing (PRDD-Seq) Reveals Cell Type-Specific Lineage Patterns in Human Brain”. Proc Natl Acad Sci U S A 117 (25): 13886-95.

Kim, Junho, Boxun Zhao, August Yue Huang, Michael B. Miller, Michael A. Lodato, Christopher A. Walsh**, and Eunjung Alice Lee**. 2020. “APP Gene Copy Number Changes Reflect Exogenous Contamination”. Nature 584: E20–E28.