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A Pan-Cancer Compendium of Genes Deregulated by Somatic Genomic Rearrangement across More Than 1,400 Cases

Publication: Journal Article

Zhang, Yiqun, Lixing Yang, Melanie Kucherlapati, Fengju Chen, Angela Hadjipanayis, Angeliki Pantazi, Christopher A. Bristow, Eunjung Alice Lee, . , and Chad J. Creighton. 2018. “A Pan-Cancer Compendium of Genes Deregulated by Somatic Genomic Rearrangement across More Than 1,400 Cases”. Cell Reports 10 (24(2): 515-27.

An enhanced genetic model of colorectal cancer progression history

Publication: Journal Article

Yang, L., S. Wang, J. J. Lee, S. Lee, E. Lee, E. Shinbrot, D. A. Wheeler, R. Kucherlapati, and Park. 2019. “An Enhanced Genetic Model of Colorectal Cancer Progression History”. Genome Biol 20: 168.

Comprehensive identification of transposable element insertions using multiple sequencing technologies

Publication: Journal Article

Chu, Chong, Rebeca Borges-Monroy, Vinayak V. Viswanadham, Soohyun Lee, Heng Li, Eunjung Alice Lee**, and Peter J. Park**. 2021. “Comprehensive Identification of Transposable Element Insertions Using Multiple Sequencing Technologies”. Nature Communications 12 (1): 3836.

Molecular Signature Expands the Landscape of Driver Negative Thyroid Cancers

Publication: Journal Article

Bim, LV, TNR Carneiro, VC Buzatto, GA Colozza-Gama, FC Koyama, Debora Mota Dias Thomaz, ACDJ Paniza, EA Lee, Pedro Alexandre Favoretto Galante, and Janete Maria Cerutti. 2021. “Molecular Signature Expands the Landscape of Driver Negative Thyroid Cancers”. Cancers 13 (20).

Identification of somatic mutations from bulk and single-cell sequencing data

Publication: Journal Article

Huang, AY, and EA Lee. 2022. “Identification of Somatic Mutations from Bulk and Single-Cell Sequencing Data”. Frontiers in Aging (mini Review) 2:800380.

A neurodevelopmental disorder caused by a novel de novo SVA insertion in exon 13 of the SRCAP gene.

Publication: Journal Article

Zhao, Boxun, Jill A. Madden, Jasmine Lin, Gerard T. Berry, Monica H. Wojcik, Xuefang Zhao, Harrison Brand, Michael Talkowski, Eunjung Alice Lee**, and Pankaj B. Agrawal**. 2022. “A Neurodevelopmental Disorder Caused by a Novel de Novo SVA Insertion in Exon 13 of the SRCAP Gene.”. European Journal of Human Genetics 30 (9): 1083-87.

Thanksgiving dinner at Gyu-Kakyu, a Japanese BBQ restaurant in Brookline.

News: November 22, 2017

Lilly Edwards

Person: Master's student, MIT

I am a student at MIT pursuing a Master’s in Computer Science and Molecular Biology. I am receiving my degree in Computer Science and Molecular Biology from MIT in 2024. My prior research explored the role of transposons in neurodegenerative diseases using single cells sequencing. I am also...

Farewell to Hyunsu, our visiting PhD student who is back to Korea!

News: July 14, 2023

Hyunsu Kim, our visiting PhD student from Sungkyunkwan University is back to Korea to finish her PhD program. Below is our farewell dinner to Hyunsu, we hope you had a great time at our lab and we wish you all the best on your next journey!

Welcome Shayna and Katherine, our first two research assistants!

News: June 05, 2023

We are excited to welcome two research assistants joining our lab this year, Shayna Mallett as a dry lab RA and Katherine Nguyen as wet lab RA. Shayna graduated as a Computer Science major from Arizona State University and Katherine graduated as a Biochemistry & Molecular Biology major from Mercer...