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Kurugol, Sila, Moti Freiman, Onur Afacan, Liran Domachevsky, Jeannette Perez-Rossello, Michael Callahan, and Simon Warfield. 2017. “Motion-Robust Parameter Estimation in Abdominal Diffusion-Weighted MRI by Simultaneous Image Registration and Model Estimation”. Med Image Anal 39: 124-32.

Machado-Rivas, Fedel, Onur Afacan, Shadab Khan, Bahram Marami, Clemente Velasco-Annis, Hart Lidov, Simon Warfield, Ali Gholipour, and Camilo Jaimes. 2021. “Spatiotemporal Changes in Diffusivity and Anisotropy in Fetal Brain Tractography”. Hum Brain Mapp 42 (17): 5771-84.

Sui, Yao, Onur Afacan, Ali Gholipour, and Simon Warfield. 2021. “Fast and High-Resolution Neonatal Brain MRI Through Super-Resolution Reconstruction From Acquisitions With Variable Slice Selection Direction”. Front Neurosci 15: 636268.

Sui, Yao, Onur Afacan, Ali Gholipour, and Simon Warfield. 2020. “Learning a Gradient Guidance for Spatially Isotropic MRI Super-Resolution Reconstruction”. Med Image Comput Comput Assist Interv 12262: 136-46.

Sui, Yao, Onur Afacan, Camilo Jaimes, Ali Gholipour, and Simon Warfield. 2021. “Gradient-Guided Isotropic MRI Reconstruction from Anisotropic Acquisitions”. IEEE Trans Comput Imaging 7: 1240-53.

Villarini, Barbara, Hykoush Asaturyan, Sila Kurugol, Onur Afacan, Jimmy Bell, and Louise Thomas. 2021. “3D Deep Learning for Anatomical Structure Segmentation in Multiple Imaging Modalities”. Proc IEEE Int Symp Comput Based Med Syst 2021: 166-71.

Khawaled, Samah, Onur Afacan, Simon K Warfield, and Moti Freiman. 2025. “A Self-Attention Model for Robust Rigid Slice-to-Volume Registration of Functional MRI.”. Computerized Medical Imaging and Graphics : The Official Journal of the Computerized Medical Imaging Society 125: 102643.

Timms, Liam, Mustafa Utkur, Cemre Ariyurek, Miriam Hewlett, Sila Kurugol, and Onur Afacan. 2026. “Fast, Robust T2-IVIM Quantitative MRI With Distortion and Motion-Corrected Multi-Echo EPI.”. Magnetic Resonance in Medicine 95 (5): 2527-37.

Valencia, Sergio, Fedel Machado-Rivas, Arman Avesta, Emil J Barkovich, Samuel C D Cartmell, Simon K Warfield, Camilo Jaimes, and Onur Afacan. 2025. “Correction: Optimizing T2* Imaging for Adolescent and Young Adult Patients at 7 T.”. Pediatric Radiology 55 (6): 1148.

Latzer, Itay Tokatly, Ellen Hanson, Mariarita Bertoldi, Melissa L DiBacco, Deniz Aygun, Onur Afacan, Àngeles García-Cazorla, et al. 2025. “The Neuropsychological Profile of SSADH Deficiency, a Neurotransmitter Disorder of GABA Metabolism.”. Molecular Genetics and Metabolism 144 (3): 109051.