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Inverted Alu repeats in loop-out exon skipping across hominoid evolution

Publication: Journal Article

Denisko, Danielle, Jeonghyeon Kim, Jayoung Ku, Boxun Zhao, and Eunjung Alice Lee. Forthcoming. “Inverted Alu Repeats in Loop-Out Exon Skipping across Hominoid Evolution”. Nucleic Acids Research, Forthcoming.

Recurrent patterns of widespread neuronal genomic damage shared by major neurodegenerative disorders

Publication: Journal Article

Zhou, Zinan, Lovelace J Luquette, Guanlan Dong, Junho Kim, Jayoung Ku, Kisong Kim, Mingyun Bae, et al. Forthcoming. “Recurrent Patterns of Widespread Neuronal Genomic Damage Shared by Major Neurodegenerative Disorders”. Cell, Forthcoming.

Somatic cancer driver mutations are enriched and associated with inflammatory states in Alzheimer's disease microglia

Publication: Journal Article

Huang, August Yue, Zinan Zhou, Maya Talukdar, Michael B Miller, Brian Chhouk, Liz Enyenihi, Ila Rosen, et al. Forthcoming. “Somatic Cancer Driver Mutations Are Enriched and Associated With Inflammatory States in Alzheimer’s Disease Microglia”. Cell, Forthcoming.

Congratulations on the publication of August and Alana's paper!

News: January 08, 2026

August and Alana's paper about RNA-MosaicHunter, a novel tool for detecting somatic single-nucleotide variants in bulk RNA-seq data, has been published in Nucleic Acids Research! Congratulations to August, Alana, Jayoung, Boxun, Jun, Jason, and everyone else who worked on this project!

Diverse somatic genomic alterations in single neurons in chronic traumatic encephalopathy

Publication: Journal Article

Dong, Guanlan, Chanthia C. Ma, Shulin Mao, Samuel M. Naik, Katherine Sun-Mi Brown, Gannon A. McDonough, Junho Kim, et al. 2025. “Diverse Somatic Genomic Alterations in Single Neurons in Chronic Traumatic Encephalopathy”. Science.

Lee Lab

Congratulations on the publication of Lan's paper!

News: October 30, 2025

After much hard work, our lab's paper about somatic mutational burdens in chronic traumatic encephalopathy (CTE), has been published in Science! Congratulations to Lan, Shulin, Junho, August, and everyone else who worked on this project!

Arnaz Maryam Tariq

Person:

Arnaz is a wet-lab research assistant originally from Bangladesh. She graduated from the University of Southern Mississippi in May 2025 with a BS in Biological Sciences (Microbiology) and a minor in Chemistry. Her honors thesis focused on the transcriptional analysis of inflammatory responses of...

Accurate detection of somatic single-nucleotide variants from bulk RNA-seq data using RNA-MosaicHunter

Publication: Journal Article

Huang, August Yue, Yuchen Cheng, Jayoung Ku, Boxun Zhao, Dachan Kim, Jaejoon Choi, and Eunjung Alice Lee. 2026. “Accurate Detection of Somatic Single-Nucleotide Variants from Bulk RNA-Seq Data Using RNA-MosaicHunter”. Nucleic Acids Research.